{ "_id": "6a27bb3f24555f66ed53b0b3", "Package": "TriLLIEM", "Type": "Package", "Title": "Log-Linear Modelling of Triad Genotype Data", "Version": "0.1.1", "Authors@R": "c(\nperson(\"Kevin Heda\", \"Zhao\", email = \"trilliemmaintainer@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(\"Kelly\", \"Burkett\", email = \"kburkett@uottawa.ca\", role = \"aut\"))", "Description": "Triad Log-Linear modelling of Imprinting Environmental\ninteractions, and Maternal effects (TriLLIEM). This is an\nimplementation of the log-linear model described in a series of\npapers, see for example Ainsworth et al. (2010)\n.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.1", "Roxygen": "list(markdown = TRUE)", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "URL": "https://github.com/KevinHZhao/TriLLIEM", "BugReports": "https://github.com/KevinHZhao/TriLLIEM/issues", "RdMacros": "Rdpack", "Repository": "https://kevinhzhao.r-universe.dev", "Date/Publication": "2026-03-11 20:38:57 UTC", "RemoteUrl": "https://github.com/kevinhzhao/trilliem", "RemoteRef": "HEAD", "RemoteSha": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-09 06:43:48 UTC", "User": "root" }, "Author": "Kevin Heda Zhao [aut, cre],\nKelly Burkett [aut]", "Maintainer": "Kevin Heda Zhao ", "MD5sum": "129517466d42ee1c28736dbd93c38a94", "_user": "kevinhzhao", "_type": "src", "_file": "TriLLIEM_0.1.1.tar.gz", "_fileid": "707534899893ea3bccb440816eb42572664ee75a76c833dd530e9ecb27fbb24c", "_filesize": 270794, "_sha256": "707534899893ea3bccb440816eb42572664ee75a76c833dd530e9ecb27fbb24c", "_created": "2026-06-09T06:43:48.000Z", "_published": "2026-06-09T07:05:35.721Z", "_distro": "noble", "_jobs": [ { "job": 80263840415, "time": 123, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7500377175" }, { "job": 80263840453, "time": 127, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7500378417" }, { "job": 80263840434, "time": 176, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7500705783" }, { "job": 80263840471, "time": 155, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7500682016" }, { "job": 80263480749, "time": 157, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7500341096" }, { "job": 80263840427, "time": 104, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7500371358" }, { "job": 80263840432, "time": 74, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7500362661" }, { "job": 80263840433, "time": 84, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7500365318" }, { "job": 80263840425, "time": 74, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7500362604" } ], "_buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/kevinhzhao/trilliem", "_commit": { "id": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "author": "Kevin Zhao ", "committer": "Kevin Zhao ", "message": "add rhub\n", "time": 1773261537 }, "_maintainer": { "name": "Kevin Heda Zhao", "email": "trilliemmaintainer@gmail.com" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "Rdpack", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "withr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "kevinhzhao", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-36", "n": 1 }, { "week": "2025-42", "n": 2 }, { "week": "2025-45", "n": 1 }, { "week": "2026-04", "n": 1 }, { "week": "2026-07", "n": 1 }, { "week": "2026-09", "n": 3 }, { "week": "2026-11", "n": 3 } ], "_tags": [], "_stars": 2, "_contributors": [ { "user": "kevinhzhao", "count": 22, "uuid": 65431430 } ], "_userbio": { "uuid": 65431430, "type": "user", "name": "Kevin Zhao" }, "_downloads": { "count": 124, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TriLLIEM" }, "_devurl": "https://github.com/kevinhzhao/trilliem", "_searchresults": 15, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/TriLLIEM.html", "manual.pdf" ], "_homeurl": "https://github.com/kevinhzhao/trilliem", "_realowner": "kevinhzhao", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-03-05" }, { "version": "0.1.1", "date": "2026-03-12" } ], "_exports": [ "fullview", "simulateData", "TriLLIEM" ], "_datasets": [ { "name": "example_dat4R", "title": "Example triad data", "object": "example_dat4R", "class": [ "TriLLIEM.sim", "data.frame" ], "fields": [ "type", "mt_MS", "mt_MaS", "M", "F", "C", "E", "D", "count" ], "rows": 15, "table": true, "tojson": true } ], "_help": [ { "page": "anova.TriLLIEM", "title": "ANOVA method for TriLLIEM objects", "topics": [ "anova.TriLLIEM" ] }, { "page": "example_dat4R", "title": "Example triad data", "topics": [ "example_dat4R" ] }, { "page": "fullview", "title": "View underlying simulation details for 'TriLLIEM.sim' objects", "topics": [ "fullview" ] }, { "page": "print.summary.TriLLIEM", "title": "Print method for 'summary.TriLLIEM' objects", "topics": [ "print.summary.TriLLIEM" ] }, { "page": "print.TriLLIEM", "title": "Print method for 'TriLLIEM' objects", "topics": [ "print.TriLLIEM" ] }, { "page": "simulateData", "title": "Simulate data for TriLLIEM", "topics": [ "simulateData" ] }, { "page": "summary.TriLLIEM", "title": "Summary function for TriLLIEM functions", "topics": [ "summary.TriLLIEM" ] }, { "page": "TriLLIEM", "title": "Fit the log-linear model to trio data", "topics": [ "TriLLIEM" ] } ], "_readme": "https://github.com/kevinhzhao/trilliem/raw/HEAD/README.md", "_rundeps": [ "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rbibutils", "Rdpack", "rlang", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_vignettes": [ { "source": "TriLLIEM.Rmd", "filename": "TriLLIEM.html", "title": "TriLLIEM", "engine": "knitr::rmarkdown", "headings": [ "Initial setup", "Simulating triad data", "Analyzing triad data", "Likelihood ratio tests" ], "created": "2025-05-18 00:31:15", "modified": "2026-02-10 20:09:05", "commits": 4 } ], "_score": 5.021189299069938, "_indexed": true, "_nocasepkg": "trilliem", "_universes": [ "kevinhzhao" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.1", "date": "2026-06-09T06:45:47.000Z", "distro": "noble", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "e08ecf3f637fd28600ff8ad708b6daea5368956be017eefeca5c29b7a7bb486f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.6.0", "os": "linux", "version": "0.1.1", "date": "2026-06-09T06:45:50.000Z", "distro": "noble", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "9cb6bd089b97cb849b51d99cf8228cdfd14e0ba71aa9c0f3406472b29c97dc4b", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1", "date": "2026-06-09T07:04:38.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "d9a68097d0a8e40135fa13316d9e620ec0e5914d89db8ea57a1d0bdc12a700a4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.6.0", "os": "mac", "version": "0.1.1", "date": "2026-06-09T07:03:15.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "01b29ee4e27f9efeb696ce0192a78bcf235ba99d28210eb3d2dafa5cda9999e4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.1", "date": "2026-06-09T06:45:47.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "1a62fc304dcd339d708d26898d959c72cabef6a693fa1ba7a6e5ffd282a74d2a", "status": "success", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.7.0", "os": "win", "version": "0.1.1", "date": "2026-06-09T06:44:54.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "f0b320d08cd90a3865f69038079b32a150e4fc671c3a0f36076a369560885808", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.5.3", "os": "win", "version": "0.1.1", "date": "2026-06-09T06:45:02.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "9af7283180085efcd9e6a771196c7d5cb7a300573304b3555e7f0f758839c0be", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" }, { "r": "4.6.0", "os": "win", "version": "0.1.1", "date": "2026-06-09T06:44:58.000Z", "commit": "fe2bf2b094eec81414d1f58e2ade62273445ce88", "fileid": "92b0d20110279f0d0c7d2f68ae1417d4d674b191a825c7775fb7840020d9a23e", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/kevinhzhao/actions/runs/27188689066" } ] }