Initial setup | Simulating triad data | Analyzing triad data | Likelihood ratio tests
Package: TriLLIEM 0.1.1
Kevin Heda Zhao
TriLLIEM: Log-Linear Modelling of Triad Genotype Data
Triad Log-Linear modelling of Imprinting Environmental interactions, and Maternal effects (TriLLIEM). This is an implementation of the log-linear model described in a series of papers, see for example Ainsworth et al. (2010) <doi:10.1002/gepi.20547>.
Authors:
TriLLIEM_0.1.1.tar.gz
TriLLIEM_0.1.1.zip(r-4.7-any)TriLLIEM_0.1.1.zip(r-4.6-any)TriLLIEM_0.1.1.zip(r-4.5-any)
TriLLIEM_0.1.1.tgz(r-4.6-any)TriLLIEM_0.1.1.tgz(r-4.5-any)
TriLLIEM_0.1.1.tar.gz(r-4.7-any)TriLLIEM_0.1.1.tar.gz(r-4.6-any)
TriLLIEM_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
TriLLIEM/json (API)
| # Install 'TriLLIEM' in R: |
| install.packages('TriLLIEM', repos = c('https://kevinhzhao.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kevinhzhao/trilliem/issues
Datasets:
- example_dat4R - Example triad data
Last updated from:fe2bf2b094. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | NOTE | 115 | ||
| source / vignettes | OK | 180 | ||
| linux-release | NOTE | 113 | ||
| macos-release | NOTE | 239 | ||
| macos-oldrel | NOTE | 193 | ||
| windows-devel | NOTE | 77 | ||
| windows-release | NOTE | 73 | ||
| windows-oldrel | NOTE | 89 | ||
| wasm-release | OK | 94 |
Exports:fullviewsimulateDataTriLLIEM
Dependencies:clidplyrgenericsgluelifecyclemagrittrpillarpkgconfigR6rbibutilsRdpackrlangtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| ANOVA method for TriLLIEM objects | anova.TriLLIEM |
| Example triad data | example_dat4R |
| View underlying simulation details for 'TriLLIEM.sim' objects | fullview |
| Print method for 'summary.TriLLIEM' objects | print.summary.TriLLIEM |
| Print method for 'TriLLIEM' objects | print.TriLLIEM |
| Simulate data for TriLLIEM | simulateData |
| Summary function for TriLLIEM functions | summary.TriLLIEM |
| Fit the log-linear model to trio data | TriLLIEM |